|
|
single-stranded_DNA + NTP <=> ssDNA/pppN(pN)n-1_hybrid + diphosphate
|
2.7.7.101
DNA primase DnaG
2.7.7.102
DNA primase AEP
|
–
–
|
|
| |
BRENDA:
BR52539
MetaCyc:
RXN0-5021
|
|
|
|
single-stranded_DNA + H2O <=> 5''-phosphooligonucleotide
|
3.1.21.2
deoxyribonuclease IV
|
–
|
|
| |
BRENDA:
BS93073
MetaCyc:
3.1.21.2-RXN
|
|
|
|
single-stranded_DNA <=> dinucleotide_(nucleate) + trinucleotide
|
3.1.11.4
exodeoxyribonuclease (phage SP3-induced)
|
–
|
|
| |
MetaCyc:
3.1.11.4-RXN
|
|
|
|
single-stranded_DNA + H2O <=> ribonucleoside_5''-monophosphate + single-stranded_oligodeoxyribonucleotide
|
3.1.11.6
exodeoxyribonuclease VII
|
–
|
|
| |
MetaCyc:
3.1.11.6-RXN
|
|
|
|
ATP + H2O + supercoiled_duplex_DNA <=> ADP + phosphate + H+ + single-stranded_DNA
|
5.6.2.d
|
–
|
|
| |
MetaCyc:
RXN-11135
|
|
|
|
single-stranded_DNA + 2''-deoxyribonucleoside_5''-triphosphate <=> ssDNA/pppN(pdN)n-1_hybrid + diphosphate
|
2.7.7.102
DNA primase AEP
|
–
|
|
| |
MetaCyc:
RXN-20059
|
|
|
|
ATP + H2O + supercoiled_duplex_DNA <=> ADP + phosphate + single-stranded_DNA
|
5.6.2.c
|
–
|
|
| |
MetaCyc:
RXN0-4261
|
|
|
|
Double-stranded_DNA + H2O <=> single-stranded_DNA + 5''-phosphomononucleotide
|
3.1.11
|
–
|
|
| |
MetaCyc:
RXN0-5039
|
|
|
|
dATP + single-stranded_DNA + (deoxyribonucleotide)m <=> dAMP + diphosphate + (deoxyribonucleotide)m+n
|
6.5.1.1
DNA ligase (ATP)
|
–
|
|
| |
BRENDA:
BS369200
|
|
|
|
dATP + single-stranded_DNA + (deoxyribonucleotide)m <=> dAMP + diphosphate + (deoxyribonucleotide)n+m
|
6.5.1.1
DNA ligase (ATP)
|
–
|
|
| |
BRENDA:
BS805
|
|
|
|
dTTP + single-stranded_DNA + (deoxyribonucleotide)m <=> dTMP + diphosphate + (deoxyribonucleotide)n+m
|
6.5.1.6
DNA ligase (ATP or NAD+)
|
–
|
|
| |
BRENDA:
BS428981
|
|
|
|
5''-O-(3-Thio)adenosine_triphosphate + single-stranded_DNA + (deoxyribonucleotide)m <=> 5''-O-(3-Thio)adenosine_monophosphate + diphosphate + (deoxyribonucleotide)n+m
|
6.5.1.1
DNA ligase (ATP)
|
–
|
|
| |
BRENDA:
BS806
|
|
|
|
single-stranded_DNA + n dNTP <=> ssDNA/pppdN(pdN)n-1_hybrid + (n-1)_diphosphate
|
2.7.7.102
DNA primase AEP
|
–
|
|
| |
BRENDA:
BR52541
|
|
|
|
single-stranded_DNA + ferrocene-labeled_dideoxy-UTP <=> ssDNA-ddUFc + diphosphate
|
2.7.7.31
DNA nucleotidylexotransferase
|
–
|
|
| |
BRENDA:
BS386695
|
|
|
|
single-stranded_DNA + H2O <=> Dinucleotide + trinucleotide
|
3.1.11.4
exodeoxyribonuclease (phage SP3-induced)
|
–
|
|
| |
BRENDA:
BS73414
|
|
|
|
Double-stranded_DNA <=> single-stranded_DNA
|
3.1.11.5
exodeoxyribonuclease V
|
–
|
|
| |
BRENDA:
BS363967
|
|
|
|
Double-stranded_DNA + H2O <=> single-stranded_DNA + 5''-phospho-2''-deoxynucleotides
|
3.1.11.3
exodeoxyribonuclease (lambda-induced)
|
–
|
|
| |
BRENDA:
BS92962
|
|
|
|
single-stranded_DNA + H2O <=> 5''-phosphomononucleotides + 5''-phosphooligonucleotides
|
3.1.30.1
Aspergillus nuclease S1
|
–
|
|
| |
BRENDA:
BS93476
|
|
|
|
single-stranded_DNA + H2O <=> 5''-phosphomononucleotides
|
3.1.11.3
exodeoxyribonuclease (lambda-induced)
|
–
|
|
| |
BRENDA:
BS92964
|
|
|
|
single-stranded_DNA + H2O <=> 5''-phosphomonoester_oligonucleotides
|
3.1.11.5
exodeoxyribonuclease V
|
–
|
|
| |
BRENDA:
BS92966
|
|
|
|
GTP + single-stranded_DNA + (deoxyribonucleotide)m <=> GMP + diphosphate + (deoxyribonucleotide)n+m
|
6.5.1.6
DNA ligase (ATP or NAD+)
6.5.1.7
DNA ligase (ATP, ADP or GTP)
|
–
–
|
|
| |
BRENDA:
BS412123
|
|
|
|
DNA-RNA_hybrid + H2O <=> single-stranded_DNA + 5''-phosphomonoester_oligonucleotides
|
3.1.26.4
ribonuclease H
|
–
|
|
| |
BRENDA:
BS390207
|
|
|
|
single-stranded_DNA + H2O <=> 5''-phosphodinucleotide + 5''-phosphooligonucleotide
|
3.1.21.1
deoxyribonuclease I
|
–
|
|
| |
BRENDA:
BS364416
|
|
|
|
single-stranded_DNA + H2O <=> Hydrolyzed_single-stranded_DNA
|
3.1.11.6
exodeoxyribonuclease VII
|
–
|
|
| |
BRENDA:
BS92969
|
|
|
|
UTP + single-stranded_DNA + (deoxyribonucleotide)m <=> UMP + diphosphate + (deoxyribonucleotide)n+m
|
6.5.1.6
DNA ligase (ATP or NAD+)
|
–
|
|
| |
BRENDA:
BS429005
|
|
|
|
single-stranded_DNA + H2O <=> fragments_of_ssDNA
|
3.1.30.1
Aspergillus nuclease S1
|
–
|
|
| |
BRENDA:
BS371166
|
|
|
|
single-stranded_DNA <=> circular_(deoxyribonucleotide)n
|
6.5.1.3
RNA ligase (ATP)
|
–
|
|
| |
BRENDA:
BS399185
|
|
|
|
ATP + single-stranded_DNA <=> adenylyl-(deoxyribonucleotide)n + diphosphate
|
6.5.1.3
RNA ligase (ATP)
|
–
|
|
| |
BRENDA:
BS399990
|
|
|
|
ADP + single-stranded_DNA + (deoxyribonucleotide)m <=> AMP + phosphate + (deoxyribonucleotide)n+m
|
6.5.1.1
DNA ligase (ATP)
6.5.1.6
DNA ligase (ATP or NAD+)
6.5.1.7
DNA ligase (ATP, ADP or GTP)
|
–
–
–
|
|
| |
BRENDA:
BS427341
|
|
|
|
ATP + single-stranded_DNA + (deoxyribonucleotide)m <=> AMP + diphosphate + (deoxyribonucleotide)m+n
|
6.5.1.1
DNA ligase (ATP)
|
–
|
|
| |
BRENDA:
BS369199
|
|
|
|
ATP + single-stranded_DNA + (deoxyribonucleotide)m <=> AMP + diphosphate + (deoxyribonucleotide)n+m
|
6.5.1.1
DNA ligase (ATP)
6.5.1.2
DNA ligase (NAD+)
6.5.1.6
DNA ligase (ATP or NAD+)
6.5.1.7
DNA ligase (ATP, ADP or GTP)
|
–
–
–
–
|
|
| |
BRENDA:
BS804
|
|
|
|
NAD+ + single-stranded_DNA + (deoxyribonucleotide)m <=> AMP + NMN + (deoxyribonucleotide)n+m
|
6.5.1.2
DNA ligase (NAD+)
6.5.1.6
DNA ligase (ATP or NAD+)
|
–
–
|
|
| |
BRENDA:
BS410916
|
|
