|
|
S-adenosyl-L-methionine + DNA <=> S-adenosyl-L-homocysteine + DNA_containing_5-methylcytosine
|
2.1.1.37
DNA (cytosine-5-)-methyltransferase
|
–
|
B
|
|
BRENDA:
BS319681
KEGG:
R00380
|
|
|
|
DNA + H2O <=> 3''_phosphooligo-deoxyribonucleotide + 2''-deoxyribonucleoside_3''-monophosphate
|
3.1.22.2
Aspergillus deoxyribonuclease K1
|
–
|
|
|
MetaCyc:
3.1.22.2-RXN
|
|
|
|
RNA-DNA_hybrid + H2O <=> DNA + nucleoside_5''-monophosphate
|
3.1.26.4
ribonuclease H
|
–
|
|
|
MetaCyc:
3.1.26.4-RXN
|
|
|
|
RNA-DNA_hybrid + H2O <=> (ribonucleotide)m + DNA
|
3.1.26.13
retroviral ribonuclease H
|
–
|
|
|
MetaCyc:
RXN-11143
|
|
|
|
DNA_with_3''-phosphate_ends + H2O <=> DNA + phosphate
|
3.1.3.32
polynucleotide 3'-phosphatase
|
–
|
|
|
BRENDA:
BS64656
|
|
|
|
alkylated_DNA + H2O <=> 3-Methyladenine + 7-methylguanine + O2-methylthymine + O2-methylcytosine + 1,N6-ethenoadenine + hypoxanthine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS416525
|
|
|
|
alkylated_DNA + H2O <=> 3-Methyladenine + 7-methylguanine + hypoxanthine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS404266
|
|
|
|
alkylated_DNA + H2O <=> 7-Methyladenine + 7-methylguanine + 3-Methyladenine + 3-Methylguanine + purine + 6-Chloropurine + xanthine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS430869
|
|
|
|
alkylated_DNA + H2O <=> 3-methyl-2''-deoxyadenosine + 3-deaza-3-methyl-2''-deoxyadenosine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS416524
|
|
|
|
DNA_containing_7-methyl-8-oxo-2''-deoxyguanosine + H2O <=> 7-methyl-8-oxo-2''-deoxyguanosine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391853
|
|
|
|
alkylated_DNA + H2O <=> 3-Methyladenine + 7-methylguanine + O2-methylthymine + O2-methylcytosine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS361299
|
|
|
|
alkylated_DNA + H2O <=> 3-Methyladenine + 3-Methylguanine + 7-Methyladenine + 7-methylguanine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS361301
|
|
|
|
alkylated_DNA + H2O <=> 3-Methyladenine + 7-methylguanine + 7-Methyladenine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS361300
|
|
|
|
alkylated_DNA + H2O <=> 3-Methyladenine + 7-methylguanine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS404265
|
|
|
|
alkylated_DNA + H2O <=> 3-Methyladenine + N3-methylcytosine + 1,N6-ethenoadenine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS391218
|
|
|
|
DNA_containing_8-oxo-2''-deoxyguanosine + H2O <=> 8-oxo-2''-deoxyguanosine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391854
|
|
|
|
dATP + depurinated_DNA <=> Deoxyribose_triphosphate + DNA
|
2.6.99.1
dATP(dGTP)---DNA purinetransferase
|
–
|
|
|
BRENDA:
BR47712
|
|
|
|
DNA_containing_8-thio-2''-deoxyguanosine + H2O <=> 8-thio-2''-deoxyguanosine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391859
|
|
|
|
DNA + H2O <=> single-stranded_DNA_fragments
|
3.1.4.4
phospholipase D
|
–
|
|
|
BRENDA:
BS93734
|
|
|
|
DNA + H2O <=> 3''-phosphopolynucleotide + 3''-phosphooligonucleotide
|
3.1.22.2
Aspergillus deoxyribonuclease K1
|
–
|
|
|
BRENDA:
BS73479
|
|
|
|
DNA <=> DNA
|
5.6.2.1
DNA topoisomerase
|
–
|
|
|
BRENDA:
BS391874
|
|
|
|
DNA + H2O <=> 5''-phosphomononucleotides + 5''-phosphooligonucleotides
|
3.1.30.1
Aspergillus nuclease S1
|
–
|
|
|
BRENDA:
BS369737
|
|
|
|
DNA + H2O <=> 5''-phosphonucleotides + 5''-phosphomononucleotides
|
3.1.30.2
Serratia marcescens nuclease
|
–
|
|
|
BRENDA:
BS93506
|
|
|
|
DNA + H2O <=> nucleoside_5''-phosphates
|
3.1.13.3
oligonucleotidase
3.1.26.1
Physarum polycephalum ribonuclease
|
–
–
|
|
|
BRENDA:
BS92995
|
|
|
|
DNA + H2O <=> deoxyribonucleoside_3''-phosphates
|
3.1.16.1
spleen exonuclease
|
–
|
|
|
BRENDA:
BS93038
|
|
|
|
DNA + H2O <=> 3''-phosphooligonucleotides + 5''-hydroxyoligonucleotides
|
3.1.22.1
deoxyribonuclease II
|
–
|
|
|
BRENDA:
BS93083
|
|
|
|
DNA_containing_ring-opened_N7-methylguanine + H2O <=> 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS370597
|
|
|
|
hypoxanthine-containing_DNA + H2O <=> hypoxanthine + DNA
|
3.2.2.15
DNA-deoxyinosine glycosylase
|
–
|
|
|
BRENDA:
BS370986
|
|
|
|
DNA_containing_5,6-dihydrouracil + H2O <=> DNA + 5,6-dihydrouracil
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS384634
|
|
|
|
DNA + H2O <=> 5''-phosphodinucleotides + 5''-phosphooligonucleotides
|
3.1.21.1
deoxyribonuclease I
|
–
|
|
|
BRENDA:
BS364417
|
|
|
|
DNA + H2O <=> nicked_DNA
|
3.1.30.1
Aspergillus nuclease S1
|
–
|
|
|
BRENDA:
BS370939
|
|
|
|
DNA + H2O <=> 3''_phosphooligonucleotides
|
3.1.22.1
deoxyribonuclease II
|
–
|
|
|
BRENDA:
BS364453
|
|
|
|
DNA_containing_8-oxo-guanine_residues + H2O <=> DNA + 8-oxoguanine
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS384638
|
|
|
|
DNA_containing_8-hydroxyguanine_residues + H2O <=> 8-oxoguanine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS361312
|
|
|
|
RNA*DNA_hybrid + H2O <=> DNA + 5''-phosphonucleotides
|
3.1.26.4
ribonuclease H
|
–
|
|
|
BRENDA:
BS374578
|
|
|
|
DNA_containing_ring-opened_N7-methylguanine_residues + H2O <=> 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS361308
|
|
|
|
1,N6-ethenoadenine_residues_in_alkylated_DNA + H2O <=> ethenoadenine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS452855
|
|
|
|
dUMP_DNA + H2O <=> dUMP + DNA
|
3.2.2.27
uracil-DNA glycosylase
|
–
|
|
|
BRENDA:
BS412017
|
|
|
|
DNA_containing_2,6-diamino-4-hydroxy-5-formamidopyrimidine_residues + H2O <=> 2,6-diamino-4-hydroxy-5-formamidopyrimidine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS361309
|
|
|
|
DNA_containing_7-hydro-8-oxoguanine_residues + H2O <=> DNA + 7-hydro-8-oxoguanine
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS361311
|
|
|
|
DNA-RNA_hybrid + H2O <=> DNA + RNA_nucleotides
|
3.1.13.2
exoribonuclease H
|
–
|
|
|
BRENDA:
BS390206
|
|
|
|
DNA-RNA_hybrid + H2O <=> DNA + 5''-phosphonucleotides
|
3.1.26.4
ribonuclease H
|
–
|
|
|
BRENDA:
BS390205
|
|
|
|
DNA_containing_dihydrouracil + H2O <=> 8-oxoguanine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391860
|
|
|
|
DNA_containing_8-oxo-guanine_residues_mispaired_to_guanine + H2O <=> DNA + 8-oxoguanine
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS384640
|
|
|
|
DNA + H2O <=> 5''-phosphodinucleotide + 5''-phosphooligonucleotide
|
3.1.21.1
deoxyribonuclease I
|
–
|
|
|
BRENDA:
BS364418
|
|
|
|
3-methyladenine_residues_in_alkylated_DNA + H2O <=> 3-Methyladenine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS452853
|
|
|
|
DNA_containing_4,6-diamino-5-formamidopyrimidine_residues + H2O <=> 4,6-diamino-5-formamidopyrimidine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS361310
|
|
|
|
DNA <=> fragments_of_DNA
|
3.1.99.B4
4.2.99.18
DNA-(apurinic or apyrimidinic site) lyase
|
–
–
|
|
|
BRENDA:
BS363438
|
|
|
|
DNA_containing_8-oxo-guanine_residues_mispaired_to_thymine + H2O <=> DNA + 8-oxoguanine
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS384641
|
|
|
|
DNA_containing_8-oxo-guanine_residues_mispaired_to_adenine + H2O <=> DNA + 8-oxoguanine
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS384639
|
|
|
|
DNA_containing_5-hydroxycytosine_residues + H2O <=> 5-hydroxycytosine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS416942
|
|
|
|
5,6-dihydrouracil-DNA + H2O <=> 5,6-dihydrouracil + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS410694
|
|
|
|
DNA + H2O <=> Hydrolyzed_DNA
|
3.1.22.4
crossover junction endodeoxyribonuclease
|
–
|
|
|
BRENDA:
BS93096
|
|
|
|
DNA + H2O <=> hydrolysed_DNA
|
3.1.21.7
deoxyribonuclease V
|
–
|
|
|
BRENDA:
BS391850
|
|
|
|
7-methylguanine_residues_in_alkylated_DNA + H2O <=> 7-methylguanine + DNA
|
3.2.2.21
DNA-3-methyladenine glycosylase II
|
–
|
|
|
BRENDA:
BS452854
|
|
|
|
DNA + H2O <=> 3''-phosphooligonucleotide
|
3.1.22.1
deoxyribonuclease II
|
–
|
|
|
BRENDA:
BS364454
|
|
|
|
DNA_containing_8-oxo-7,8-dihydroguanine_residues + H2O <=> DNA + 8-oxoguanine
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS384636
|
|
|
|
DNA + H2O <=> specific_double-stranded_DNA_fragments_with_terminal_5''-phosphate
|
3.1.21.5
type III site-specific deoxyribonuclease
|
–
|
|
|
BRENDA:
BS93081
|
|
|
|
DNA + H2O <=> double-stranded_DNA_fragments_with_terminal_5''-phosphates
|
3.1.21.4
type II site-specific deoxyribonuclease
|
–
|
|
|
BRENDA:
BS93076
|
|
|
|
nitrated_DNA + NADPH <=> DNA + NADP+ + H2O
|
1.8.1.4
dihydrolipoyl dehydrogenase
|
–
|
|
|
BRENDA:
BS375201
|
|
|
|
DNA_containing_2,6-diamino-4-hydroxyformamidopyrimidine_residues + H2O <=> 2,6-diamino-4-hydroxyformamidopyrimidine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS370599
|
|
|
|
DNA_containing_7-hydro-8-oxoguanine + H2O <=> 7-hydro-8-oxoguanine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS370598
|
|
|
|
DNA_containing_8-hydroxyadenine_residues + H2O <=> 6-amino-7,9-dihydropurin-8-one + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS361313
|
|
|
|
5''_end-labeled_50-nt_RNA_annealed_to_a_77-nt_DNA_template <=> DNA + RNA_fragments
|
3.1.13.2
exoribonuclease H
|
–
|
|
|
BRENDA:
BS364124
|
|
|
|
3''_end-labeled_41-nt_RNA_annealed_to_a_77-nt_DNA_template <=> DNA + RNA_fragments
|
3.1.13.2
exoribonuclease H
|
–
|
|
|
BRENDA:
BS364125
|
|
|
|
DNA_containing_8-hydroxyadenine + H2O <=> DNA + 8-oxoguanine
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS384635
|
|
|
|
DNA_containing_8-oxoguanine_opposite_A + H2O <=> 8-oxoguanine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391855
|
|
|
|
DNA_containing_8-oxoguanine_opposite_C + H2O <=> 8-oxoguanine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391856
|
|
|
|
DNA_containing_8-oxoguanine_opposite_G + H2O <=> 8-oxoguanine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391857
|
|
|
|
DNA_containing_8-oxoguanine_opposite_T + H2O <=> 8-oxoguanine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391858
|
|
|
|
DNA + H2O <=> LexA-DNA_complexes
|
3.4.21.88
repressor LexA
|
–
|
|
|
BRENDA:
BS394319
|
|
|
|
5''_end-labeled_41-nt_RNA_annealed_to_a_77-nt_DNA_template <=> DNA + RNA_fragments
|
3.1.13.2
exoribonuclease H
|
–
|
|
|
BRENDA:
BS364123
|
|
|
|
DNA + H2O <=> 3''-deoxymononucleotides + dinucleotides
|
3.1.31.1
micrococcal nuclease
|
–
|
|
|
BRENDA:
BS93509
|
|
|
|
2,6-diamino-4-hydroxy-5-formamidopyrimidine-DNA + H2O <=> 2,6-diamino-4-hydroxy-5-formamidopyrimidine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS410683
|
|
|
|
DNA_containing_5-hydroxy-5-methylhydantoin_residues_opposite_cytosine + H2O <=> 5-hydroxy-5-methylhydantoin + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS416941
|
|
|
|
DNA_containing_5-hydroxyuracil_residues + H2O <=> 5-Hydroxyuracil + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS416943
|
|
|
|
DNA_containing_8-oxo-7,8-dihydropurine + H2O <=> 8-hydroxypurine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS416944
|
|
|
|
DNA_containing_dihydrothymine_residues + H2O <=> Dihydrothymine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS416946
|
|
|
|
DNA <=> positively_supercoiled_DNA
|
5.6.2.2
DNA topoisomerase (ATP-hydrolysing)
|
–
|
|
|
BRENDA:
BS426344
|
|
|
|
DNA + H2O <=> 5''-phosphoryltermini_DNA + 3''-hydroxyltermini_DNA
|
3.1.21.7
deoxyribonuclease V
|
–
|
|
|
BRENDA:
BS189625
|
|
|
|
DNA_containing_7,8-dihydro-8-oxoguanine_residues + H2O <=> DNA + 8-oxoguanine
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS431819
|
|
|
|
DNA_containing_7-methyl-7-deazaguanine_residues + H2O <=> 7-methyl-7-deazaguanine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS431820
|
|
|
|
DNA_containing_8-oxo-2''-deoxyguanosine_residues + H2O <=> DNA + 8-oxo-2''-deoxyguanosine
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS430963
|
|
|
|
DNA_containing_formamidopyrimidine-guanine_residues + H2O <=> 4,6-diamino-5-formamidopyrimidine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS431821
|
|
|
|
DNA_containing_methylated_formamidopyrimidine-guanine_residues + H2O <=> 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS431822
|
|
|
|
DNA_containing_tetrahydrofuran_residues + H2O <=> tetrahydrofuran + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS431823
|
|
|
|
DNA_containing_oxoG_opposite_C_or_A + H2O <=> 2,6-diamino-4-hydroxy-5-formamidopyrimidine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS447479
|
|
|
|
DNA + ATP + H2O <=> DNA + ADP + phosphate
|
5.6.2.2
DNA topoisomerase (ATP-hydrolysing)
5.99.1.3
DNA topoisomerase (ATP-hydrolysing)
|
–
–
|
|
|
BRENDA:
BS424385
|
|
|
|
DNA + H2O <=> deoxynucleoside_3''-phosphates
|
3.1.14.1
yeast ribonuclease
|
–
|
|
|
BRENDA:
BS364211
|
|
|
|
DNA_containing_guanidinohydantoin + H2O <=> guanidinohydantoin + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391861
|
|
|
|
DNA_containing_spiroiminodihydantoin + H2O <=> spiroiminodihydantoin + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391862
|
|
|
|
DNA + H2O <=> acrolein + 5''-phosphate_DNA-termini
|
3.1.21.7
deoxyribonuclease V
|
–
|
|
|
BRENDA:
BS189622
|
|
|
|
DNA + H2O <=> single-stranded_DNA_fragments + 2''-deoxynucleoside_5''-phosphate
|
3.1.4.1
phosphodiesterase I
|
–
|
|
|
BRENDA:
BS139759
|
|
|
|
DNA_containing_7-deaza-2''-deoxyguanosine + H2O <=> 7-deaza-2''-deoxyguanosine + DNA
|
3.2.2.23
DNA-formamidopyrimidine glycosylase
|
–
|
|
|
BRENDA:
BS391852
|
|